SupplementalTable. Putative up- and down-regulated genes during symbiosis, micraerobic growth and starvation that are estimated by macroarray analysis of Mesorhizobium loti MAFF303099
Condition Gene Gene annotation Locationa Signal ratio M13 clone RpoN-regulon
Bacteroid vs Free-living ( Up-regulated; Baceroid signal > 1.0, Bacteroid/Free living ratio > 20, 53 clones, 99 genes)
mll9289 Unknown protein pMLa 1588 RLB09793 -
mll5873 Peroxiredoxin 2 family protein SYM 702 RLB07951 +
mlr5875 Unknown protein SYM 702 RLB07951 +
mlr5876 Cytochrome P450 SYM 702 RLB07951 +
mlr5906 Nitrogenase Mo-Fe protein alpha chain; NifD SYM 698 RLB09405 +
mlr5907 Nitrogenase Mo-Fe protein beta chain, NifK SYM 698 RLB09405 +
mlr6210 Glutamine synthetase III SYM 577 RLB04931 +
mlr6209 Histidine decarboxylase SYM 577 RLB04931 +
mlr5943 L-2,4-Diaminobutyric acid transaminase SYM 223 RLB13370 -
mlr5944 Unknown protein SYM 223 RLB13370 -
mlr6283 L-Proline 3-hydroxylase SYM 185 RLB21690 +
mlr6282 Phosphinothricin tripeptide synthetase B SYM 185 RLB21690 +
mlr6412 Cytochrome-C oxidase FixO chain SYM 168 RLB04732 -
msr6413 Cytochrome-C oxidase FixQ chain SYM 168 RLB04732 -
mlr6414 Cytochrome-C oxidase FixP chain SYM 168 RLB04732 -
mll6128 Transposase SYM 119 RLB05168 -
mlr6129 Transcriptional regulator SYM 119 RLB05168 -
mlr6130 L-Threonine aldolase SYM 119 RLB05168 -
mll6127 Outer membrane protein SYM 100 RLB13143 +
msr5972 Transposase SYM 98 RLB21047 -
mlr5973 Integrase / Recombinase SYM 98 RLB21047 -
mlr5971 L-Lysine 2,3-aminomutase SYM 98 RLB21047 -
mll6211 Alanine racemase SYM 91 RLB18566 -
mll6212 Hypothetical protein SYM 91 RLB18566 -
msl6213 Hypothetical protein SYM 91 RLB18566 -
mlr9125 Unknown protein pMLa 82 RLB06536 -
mlr9393 Nodulation protein, NoeC pMLa 67 RLB04412 -
mll5864 Nitrogenase stabilizer NifW SYM 66 RLB16489 -
mll5865 Nitrogenase cofactor synthesis protein NifS SYM 66 RLB16489 -
mll5862 Nitrogen fixation protein, FixA SYM 66 RLB16489 +
mll6207 DNA-damage-inducible protein SYM 64 RLB23401 -
mll5872 RNA poymerase sigma-54 factor, RpoN SYM 62 RLB19968 +
mlr5869 Ferredoxin 2[4Fe-4S] III, FdxB SYM 62 RLB19968 -
mlr5871 Nitrogen fixation protein,  NifQ SYM 62 RLB19968 -
mlr5923 Lysine:N6-hydroxylase SYM 61 RLB19159 +
mlr5908  Nitrogenase molybdenum-cofactor synthesis protein NifE  SYM 60 RLB22002 +
mlr5924 Unknown protein SYM 58 RLB15637 -
msl5996 Transposase SYM 56 RLE17977 -
msr5997 Transposase SYM 56 RLE17977 -
mlr5932 1-Aminocyclopropane-1-carboxylate deaminase SYM 53 RLB15575 +
msl5852 Hypothetical protein (FixU protein) SYM 52 RLB14963 +
mll5854 Hypothetical protein (NifZ protein) SYM 52 RLB14963 +
msl8750 Ferredoxin 2[4Fe-4S], fdxN  SYM 52 RLB14963 -
msl9543 Unknown protein pMLb 50 RLB30263 -
msr6073 Unknown protein SYM 49 RLB21494 -
mll5855 Nitrogen fixation protein NifB SYM 47 RLB07476 -
mll5857 Nif-specific regulatory protein,NifA SYM 47 RLB07476 +
msl5859 Ferredoxin like protein, FixX SYM 47 RLB07476 +
mll5860 Nitrogen fixation protein,FixC SYM 47 RLB07476 +
mlr5876 Cytochrome P450 SYM 46 RLB06802 -
msr5877 Unknown protein SYM 46 RLB06802 -
mlr5878 gamma-BHC dehydrochlorinase SYM 46 RLB06802 -
mlr6114 Serine hydroxymethyltransferase SYM 46 RLB15002 -
mlr6115 S-Adenosylmethionine synthetase SYM 46 RLB15002 -
msr5997 Transposase SYM 42 RLB05087 -
mll5998 Hypothetical protein SYM 42 RLB05087 -
mlr1030 Hypothetical protein OUT 41 RLB23080 -
msl1031 Unknown protein OUT 41 RLB23080 -
mlr6411 Cytochrome-c oxidase FixN chain SYM 41 RLB04306 -
mlr6412 Cytochrome-c oxidase FixO chain SYM 41 RLB04306 -
msr6413 Cytochrome-c oxidase FixQ chain SYM 41 RLB04306 -
mlr6414 Cytochrome-c oxidase FixP chain SYM 41 RLB04306 -
mlr9158 Unknown protein pMLa 39 RLB12562 +
mlr9053 Polyketide synthase pMLa 38 RLB14939 -
mll9228 Hypothetical protein pMLa 38 RLB19774 -
mll9229 Unknown protein pMLa 38 RLB19774 -
msr9403 Unknown protein pMLa 38 RLB19774 -
mlr6296 putative Carboxylase SYM 37 RLB24292 -
mlr6298 gamma-Glutamyl kinase SYM 37 RLB24292 -
mll6059 Unknown protein SYM 35 RLB09183 -
msl6060 Unknown protein SYM 35 RLB09183 -
msr6061 Unknown protein SYM 35 RLB09183 -
msr8685 Unknown protein SYM 35 RLB09183 -
mll9215 Unknown protein pMLa 34 RLB03780 -
mlr4566 Glycine-rich cell wall protein OUT 33 RLE43945 -
mlr7874 Unknown protein OUT 33 RLB05086 -
mlr5971 L-Lysine 2,3-aminomutase SYM 32 RLB05022 +
mll6062 Hypothetical protein SYM 29 RLB17782 -
mlr6063 Transposase SYM 29 RLB17782 -
mlr5845 Hypothetical protein SYM 28 RLB23990 -
mlr6117 Carbohydrate kinase SYM 27 RLB10494 -
mlr9121 Unknown protein pMLa 27 RLB12270 -
mll9123 NTA monooxygenase component A pMLa 27 RLB12270 -
mlr9216 probable Malate dehydrogenase pMLa 27 RLB13072 +
mlr9217 Dibenzothiophene desulfurization enzyme pMLa 27 RLB13072 -
mlr5882 Phosphoenolpyruvate Mutase SYM 26 RLB24892 -
mlr5883 Aspartate transaminase SYM 26 RLB24892 -
msl9407 Unknown protein pMLa 26 RLB06943 -
mlr9369 Hypothetical protein pMLa 26 RLB06943 -
mll9370 Unknown protein pMLa 26 RLB06943 -
mlr9371 Alanine racemase pMLa 26 RLB06943 -
mlr6056 Hypothetical protein SYM 24 RLB15113 -
msl6057 Unknown protein SYM 24 RLB15113 -
mlr6226 Methyltransferase SYM 24 RLB03779 -
mll8752 Unknown protein SYM 22 RLB00654 +
mll6628 Cytochrome-c oxidase FixP chain OUT 21 RLB22846 -
msl6627 Nitrogen fixation protein FixQ OUT 21 RLB22846 -
mll6629 Cytochrome-c oxidase FixO chain OUT 21 RLB22846 -
mll6630 Cytochrome-c oxidase FixN chain OUT 21 RLB22846 -
Bacteroid vs Free-living ( Down-regulated; Free-living signal > 1.0, Bacteroid/Free living ratio < 1/20, 14 clones, 26 genes)
mll5741 Unknown protein OUT 0.013 RLB07534 -
mlr7339 Putative glycosyl transferase OUT 0.018 RLB04438 -
mll7338 Unknown protein OUT 0.018 RLB04438 -
mlr2921 Flagellar L-ring protein, FlgH OUT 0.02 RLB24577 -
mlr2924 Flagellar biosynthesis protein, FliP OUT 0.02 RLB24577 -
mlr2923 Hypothetical protein, FliL OUT 0.02 RLB24577 -
mlr4158 similarity to NADH oxidase OUT 0.026 RLB07682 -
msr4160 Unknown protein OUT 0.026 RLB07682 -
mll8302 Transcriptional regulator OUT 0.03 RLB08293 -
mlr8303 Homogentisate 1,2-dioxygenase OUT 0.03 RLB08293 -
mll1017 3-Oxoacyl-acyl carrier protein reductase OUT 0.033 RLB14419 -
mll1018 Probable racemase OUT 0.033 RLB14419 -
mll3069 ABC transporter, periplasmic binding protein OUT 0.034 RLB12771 -
mll3070 Dehydrogenase, (alcohol, 4-hydroxybutyrate) OUT 0.036 RLB10653 -
mll1028 Rhizobiocin RzcA OUT 0.036 RLB07493 -
mlr7341 Putative O-antigen methyl transferase OUT 0.039 RLB06910 -
mlr2925 Flagellin(FlaA) OUT 0.041 RLB23320 -
mlr7225 Unknown protein OUT 0.043 RLB23327 -
mlr7226 Sugar ABC transporter, permease protein OUT 0.043 RLB23327 -
mlr2648 Probable cold shock protein OUT 0.05 RLB18891 -
msr2651 Unknown protein OUT 0.05 RLB18891 -
msr2650 Unknown protein OUT 0.05 RLB18891 -
msr5593 Fimbriae associated protein OUT 0.05 RLB04449 -
mlr5594 Type IV prepilin peptidase, CpaA OUT 0.05 RLB04449 -
msr5592 Unknown protein OUT 0.05 RLB04449 -
mll7254 Glutamine synthetase OUT 0.05 RLB05534 -
Microaerobic vs Aerobic ( Up-regulated; Microaerobic signal > 0.5, Microaerobic/Aerobic ratio > 2, 37 clones, 83 genes)
mlr6412 Cytochrome-c oxidase FixO chain SYM RLB04732 -
msr6413 Cytochrome-c oxidase FixQ chain SYM RLB04732 -
mlr6414 Cytochrome-c oxidase FixP chain SYM RLB04732 -
mll6610 Unknown protein OUT 182 RLB14558 -
mll6611 Hypothetical protein OUT 182 RLB14558 -
mll6628 Cytochrome-c oxidase FixP chain OUT 182 RLB22846 -
msl6627 Nitrogen fixation protein FixQ OUT 182 RLB22846 -
mll6629 Cytochrome-c oxidase FixO chain OUT 182 RLB22846 -
mll6630 Cytochrome-c oxidase FixN chain OUT 182 RLB22846 -
mlr6591 Hypothetical protein OUT 95 RLB11128 -
msl6623 Nitrogen fixation protein FixS OUT 61 RLB14257 -
mll6593 Hypothetical protein OUT 49 RLB07284 -
mlr6594 Hypothetical protein OUT 49 RLB07284 -
mll6595 Hypothetical protein OUT 49 RLB07284 -
mll6596 Hypothetical protein OUT 49 RLB07284 -
mlr6411 Cytochrome-c oxidase FixN chain SYM 42 RLB04306 -
mll6639 Aldehyde dehydrogenase OUT 37 RLB12389 -
mll6640 Transcriptional regulator OUT 37 RLB12389 -
mll6632 Fnr-type transcriptional regulator OUT 22 RLB22521 -
mlr6633 Anaerbic coproporphyrinogen III oxidase OUT 22 RLB22521 -
mll6635 Unknown protein OUT 22 RLB22521 -
mll6637 Hypothetical protein OUT 22 RLB22521 -
mlr6415 Nitrogen fixation protein FixG SYM 16 RLB06955 -
mlr6416 Nitrogen fixation protein FixH SYM 16 RLB06955 -
mll6586 Hypothetical protein OUT 16 RLB18158 -
mll6587 Unknown protein OUT 16 RLB18158 -
mll6613 Hypothetical protein OUT 15 RLB18437 -
msl6615 Unknown protein OUT 15 RLB18437 -
mlr6631 Unknown protein OUT 15 RLB20675 -
mlr6579 Hypothetical protein OUT 13 RLB17832 -
mlr6580 Serine/threonine kinase OUT 13 RLB17832 -
mlr6581 Hypothetical protein OUT 13 RLB17832 -
mll6620 similar to Thiamine biosynthesis lipoprotein OUT 12 RLB24929 -
mll6621 Unknown protein OUT 12 RLB24929 -
mlr6622 similar to Nodulin 21 OUT 12 RLB24929 -
mlr4720 Small heat-shock protein OUT 11 RLB17084 -
mlr4721 Small heat shock protein (class I) OUT 11 RLB17084 -
mlr4722 Protoporphyrinogen oxidase OUT 11 RLB17084 -
mlr0125 Lysozyme OUT 10 RLB12360 -
mlr0127 Unknown protein OUT 10 RLB12360 -
mll0128 Hypothetical protein OUT 10 RLB12360 -
mll0129 Transcriptional activator AmpR OUT 10 RLB12360 -
msl6584 Unknown protein OUT 9.2 RLB17366 -
mlr6585 Unknown protein OUT 9.2 RLB17366 -
mll6587 Unknown protein OUT 9.2 RLB17366 -
mlr6575 Hypothetical protein OUT 8.6 RLB15794 -
mlr6576 Acetate kinase OUT 8.6 RLB15794 -
mlr6601 Unknown protein OUT 8.2 RLB16521 -
msr6604 Unknown protein OUT 8.2 RLB16521 -
mll6596 Hypothetical protein OUT 7.7 RLB08379 -
mll6598 Unknown protein OUT 7.7 RLB08379 -
mll6600 5-Aminolevulinic acid synthase (ALAS) OUT 7.7 RLB08379 -
mll6577 Hypothetical protein OUT 6.7 RLB04979 -
mll6578 Nirogen fixation regulation protein FixK OUT 6.7 RLB04979 -
mlr6390 Coproporphyrinogen III dehydrogenase SYM 6.3 RLB15745 -
mll6391 Unknown protein SYM 6.3 RLB15745 -
msl6392 Unknown protein SYM 6.3 RLB15745 -
msl9634 Unknown protein pMLb 4.7 RLB30442 -
mll3429 Endopeptidase Clp ATP-binding chain B, clpB OUT 4.5 RLB04574 -
mlr5276 Succinoglycan biosynthesis transport protein ExoP OUT 4.5 RLB17154 +
mll5277 Transcriptional regulator OUT 4.5 RLB17154 -
mlr5642 Two-component sensor histidine kinase, PhoR OUT 4.3 RLB20679 -
mlr5643 Phosphate regulon transcriptional regulator, PhoU OUT 4.3 RLB20679 -
mlr4831 Phenylalanine-4-hydroxylase (EC 1.14.16.1) OUT 3.7 RLB16390 -
mll4832 Hypothetical protein OUT 3.7 RLB16390 -
mlr4833 Transcriptional regulator OUT 3.7 RLB16390 -
mlr8469 Sarcosine oxidase OUT 3.0 RLB23576 -
mll8471 Unknown protein OUT 3.0 RLB23576 -
mll4002 Filament-A precursor [Bartonella bacilliformis] OUT 2.5 RLB17102 -
mll4004 Hypothetical protein OUT 2.5 RLB17102 -
mll4004 Hypothetical protein OUT 2.5 RLB17783 -
mll4005 Hypothetical protein OUT 2.5 RLB17783 -
mll2610 Unknown protein OUT 2.4 RLB04108 -
mlr2611 Unknown protein OUT 2.4 RLB04108 -
mlr3426 Hypothetical protein OUT 2.4 RLB16392 -
mll3427 Unknown protein OUT 2.4 RLB16392 -
mll3428 Hypothetical protein OUT 2.4 RLB13282 -
mlr7636 Superoxide dismutase OUT 2.3 RLB14873 -
mlr7638 Cytochrome c556 OUT 2.3 RLB14873 -
mlr7639 Cytochrome c-553 OUT 2.3 RLB14873 -
mlr8310 Transcriptional regulator OUT 2.3 RLB17257 -
mll8311 Hypothetical protein OUT 2.3 RLB17257 -
mll1454 FtsH protease activity modulator HflC OUT 2.2 RLB13449 -
Microaerobic vs Aerobic ( Down-regulated; Aerobic signal > 0.5, Microaerobic/Aerobic ratio > 1/2, 12 clones, 22 genes)
mlr2692 50S Ribosomal protein L25 OUT 0.095 RLB23015 -
mlr2694 Peptidyl-tRNA hydrolase OUT 0.095 RLB23015 -
msl5090 Phosphocarrier protein HPr OUT 0.13 RLB19253 -
mll0650 Elongation factor Ts OUT 0.18 RLB13558 -
mll0651 30S ribosomal protein S2 OUT 0.18 RLB13558 -
mlr5562 Polyribonucleotide nucleotidyltransferase OUT 0.24 RLB21194 -
mll5035 Hypothetical protein, contains similarity to isomerase OUT 0.28 RLB08881 -
mlr5036 Xylose isomerase (EC 5.3.1.5) OUT 0.28 RLB08881 -
mll5057 Ribosomal protein L20 OUT 0.33 RLB19461 -
msl5059 Ribosomal protein L35 OUT 0.33 RLB19461 -
mll5060 Nickel-cobalt-cadmium resistance protein NccN OUT 0.33 RLB19461 -
mlr7559 Hypothetical protein OUT 0.35 RLB19378 -
mlr7560 Hypothetical protein OUT 0.36 RLB04376 -
mll5088 S-Adenosyl L-homocystein hydrolase OUT 0.37 RLB06370 -
mll4273 Unknown protein OUT 0.41 RLB14715 -
msl1767 Hypothetical protein OUT 0.42 RLB24095 -
mll1768 Unknown protein OUT 0.42 RLB24095 -
msl1769 Unknown protein OUT 0.42 RLB24095 -
mll5591 Unknown protein OUT 0.43 RLB04449 -
msr5592 Unknown protein OUT 0.43 RLB04449 -
msr5593 Fimbriae associated protein OUT 0.43 RLB04449 -
mlr5594 Type IV prepilin peptidase, CpaA OUT 0.43 RLB04449 -
Carbon starvation vs Unstarvation (Up-regulated; Starvation signal > 1.0, Starved/Unstarved ratio > 2, 31 clones, 56 genes)
mlr0479 Succinoglycan biosynthesis protein ExoI OUT 18 RLB14552
mlr0480 Unknown protein OUT 18 RLB14552
mll0710 Glycerol-3-phosphate dehydrogenase OUT 14 RLB25054
mll1644 probable Sterol methyltransferase OUT 11 RLB06335
mlr2338 Hypothetical protein OUT 9.5 RLB20249
mlr2341 Hypothetical protein OUT 9.5 RLB20249
mll1629 Dihydropyrimidinase OUT 6.0 RLB06680
mll1631 N-Carbamoyl-beta-alanine amidohydrolase OUT 6.0 RLB06680
mll3075 Amino acid/metabolite permease OUT 5.4 RLB08066
mll3076 Hypothetical protein OUT 5.4 RLB08066
mlr4771 Secreted sugar-binding protein OUT 5.0 RLB10318
mll5113 alpha-Glucosides ABC transporter, substrate-binding protein OUT 4.1 RLB12486
mll7714 AMP nucleosidase OUT 3.6 RLB18102
msl7716 Unknown protein OUT 3.6 RLB18102
msl7717 Unknown protein OUT 3.6 RLB18102
mll7718 Unknown protein OUT 3.6 RLB18102
mll3074 Glutamine synthetase OUT 3.4 RLB19274
msl3793 Unknown protein OUT 3.0 RLB00215
msr3794 Unknown protein OUT 3.0 RLB00215
mll3795 Transcriptional regulator OUT 3.0 RLB00215
mlr6533 ABC transporter, polyamine transport protein OUT 2.9 RLB13229
mll6710 Transcriptional regulator OUT 2.9 RLB23708
msr6711  Neurogranin, protein kinase C substrate, calmodulin-binding protein OUT 2.9 RLB23708
mll1646 Glutamate synthase beta subunit OUT 2.8 RLB07742
mll1647 Hypothetical protein OUT 2.8 RLB07742
mll5107 alpha-Glucosides ABC transporter, ATP-binding protein OUT 2.8 RLB23389
mll1632 beta-Alanine-pyruvate transaminase OUT 2.7 RLB17456
mlr1634 probable Transcriptional regulator OUT 2.7 RLB17456
mll3072 Dehydrogenase OUT 2.5 RLB12771
mll1621 Hypothetical protein OUT 2.4 RLB06694
mll1623 Permease protein of ABC transporter OUT 2.4 RLB06694
mlr2852 Cardiolipin synthase OUT 2.4 RLB15975
mlr8151 Amino acid ABC transporter, permease protein OUT 2.4 RLB13918
mlr8153 Amino acid ABC transporter, permease protein OUT 2.4 RLB13918
mlr0545 Hypothetical protein OUT 2.3 RLB24429
mlr0547 Molybdopterin-guanine dinucleotide biosynthesis protein A OUT 2.3 RLB24429
mlr0548 Molybdopterin-guanine dinucleotide biosynthesis protein B OUT 2.3 RLB24429
mlr1585 Hypothetical protein OUT 2.3 RLB22932
mll3069 ABC transporter, periplasmic binding protein OUT 2.3 RLB10653
mll3070 Dehydrogenase OUT 2.3 RLB10653
mlr4713 Large conductance mechanosensitive channel OUT 2.3 RLB04063
msl4714 Transglycosylase associated protein, (integral membrane protein) OUT 2.3 RLB04063
mlr4715 Unknown protein OUT 2.3 RLB04063
mll7596 Unknown protein OUT 2.3 RLB24890
mlr7597 ABC transporter, peptide-binding protein OUT 2.3 RLB24890
mlr0549 probable Amino acid binding protein of ABC transporter OUT 2.2 RLB18460
mlr0550 probable Permease of ABC transporter OUT 2.2 RLB18460
msl1345 Unknown protein OUT 2.2 RLB09941
mll1346 Hypothetical protein OUT 2.2 RLB09941
mll1659 Permease protein of oligopeptide ABC transporter OUT 2.2 RLB14373
mll4697 Two-component system response regulator OUT 2.2 RLB15814
mll4698 Two-component system histidine protein kinase (FixL like) OUT 2.2 RLB15814
mll1116 Unknown protein OUT 2.1 RLB06668
msr2658 probable Cold shock protein OUT 2.1 RLB19030
msl8626 Unknown protein OUT 2.1 RLB19030
mlr2659 Unknown protein OUT 2.1 RLB19030
Carbon starvation vs Unstarvation (Down-regulated; Unstarvation signal > 1.0, Starved/Unstarved ratio < 1/2, 16 clones, 32 genes)
mlr4864 Molecular chaperone, SugES homolog OUT 0.10 RLB00744
mll4866 Unknown protein OUT 0.10 RLB00744
mlr7582 Sugar ABC transporter, periplasmic sugar-binding protein OUT 0.11 RLB11572
mlr7584 Sugar ABC transporter, permease protein OUT 0.11 RLB11572
mll7583 Sugar ABC transporter, ATP binding protein OUT 0.11 RLB11572
mlr0286 Unknown protein OUT 0.12 RLB24404
msl0282 Two component response regulator OUT 0.13 RLB03510
mlr0283 30S Ribosomal protein S12 OUT 0.13 RLB03510
mlr0284 30S Ribosomal protein S7 OUT 0.13 RLB03510
mll7581 Hypothetical protein, FucU OUT 0.16 RLB11863
mlr3552 50S Ribosomal protein L28 OUT 0.21 RLB12095
mll3551 Unknown protein OUT 0.21 RLB12095
mlr0273 50S Ribosomal protein L1 OUT 0.24 RLB23276
mlr0271 50S Ribosomal protein L11 OUT 0.24 RLB23276
mlr2692 50S Ribosomal protein L25 OUT 0.25 RLB23015
mlr2694 Peptidyl-tRNA hydrolase OUT 0.25 RLB23015
msl5090 Phosphocarrier protein HPr OUT 0.25 RLB19253
mll5088 S-Adenosyl L-homocystein hydrolase OUT 0.25 RLB19253
mll5061 Translation initiation factor IF-3 OUT 0.26 RLB19461
mll5057 Ribosomal protein L20 OUT 0.26 RLB19461
msl5059 Ribosomal protein L35 OUT 0.26 RLB19461
mll5060 Nickel-cobalt-cadmium resistance pretein NccN OUT 0.26 RLB19461
mll0651 30S Ribosomal protein S2 OUT 0.27 RLB13558
mll0650 Elongation factor Ts OUT 0.27 RLB13558
msr1062 Unknown protein OUT 0.28 RLB07632
mll4807 Histidine protein kinase sensor for nitrogen regulator II, NRII (GlnG) OUT 0.29 RLB16514
mlr5551 N Utilization substance protein A OUT 0.29 RLB23589
mlr5550 Hypothetical protein OUT 0.29 RLB23589
msl5548 Unknown protein OUT 0.29 RLB23589
mll8552 Unknown protein OUT 0.29 RLB06282
mll5213 3-Phosphoshikimate 1-carboxyvinyltransferase OUT 0.31 RLB25092
Å@ mll5212 Cytidylate monophosphate kinase OUT 0.31 RLB25092 Å@
a, Gene location was expressed as plasmids (pMLa and pMLb) and inside (SYM) and outside (OUT) of simbiosis island in Mesorhizobium loti MAFF303099 genome (Kaneko et al. 2000, ref13).

b, Gene with -24/-12 type promoter consensus (Dombrecht et al. 2002, ref7)