Welcome to MacroArray Analysis Page of Mesorhizobium loti MAFF303099 (Updated: 8/9/04)

Links to Pages for Genome-wide Expression Difference between Two Conditions

(1) Averaged Data
(currently publicly available only for symbiosis island region)

[Free_average vs Bac_average] & [Free_average vs Starved_average] & [Aero_average vs Microaero_average]

(2) Data of Individual Experiments (not publicly available)

Free_living vs Bacteroid

Free_living vs Starved

Aero vs Microaero



Links to Supplemental Information

(1) Commulative List of Up and Down-regulated Genes (Supplemental Table)
[View web-page] or [download pdf-document]

(2) Commulative List of Genes Commonly Regulated in both MAFF3039099 and R7A under Symbiotic Condition, together with MAFF Specific Genes
[View web-page] or [download pdf-document]

(3) Comparison of gene expression for amino acid metabolism between bacteroids and free-living cells (Supplemental Table 2)
[download pdf-document]

New (4) List of primers used in RT-PCR experimetns.
[View web-page] or [download pdf-document]


Search for data related to an ORF of interest: Free_living vs Bacteroid
(not publicly available yet)


orf name

(1) chromosome(7,036,071 bp)

a) Select region of interest by image map: crick second innermost part

b) Choose genome region of interest by coordinate

numberkbp

c) free_vs_bac correlation plot

(2) pMLa(351,911 bp)

a) Select region of interest by image map: crick second innermost part

b) Choose genome region of interest by coordinate

numberkbp

c) free_vs_bac correlation plot

(3) pMLb(208,315 bp)

a) Select region of interest by image map: crick second innermost part

b) Choose genome region of interest by coordinate

numberkbp

c) free_vs_bac correlation plot


Search for data related to an ORF of interest: Minimum vs Starved
(not publicly available yet)
orf name


(1) chromosome(7,036,071 bp)

a) Select by image map

b) Choose genome region of interest by coordinate

numberkbp


c) minimum_vs_starved correlation plot

(2) pMLa(351,911 bp)

a) Select by image map

b) Choose genome region of interest by coordinate

numberkbp

c) minimum_vs_starved correlation plot

(3) pMLb(208,315 bp)

a) Select by image map

b) Choose genome region of interest by coordinate

numberkbp

c) minimum_vs_starved correlation plot


Search by a particular probe clone
(not publicly available yet)
clone name
(clone name = RLB????? RLE?????)


Identity of probe clones
(not publicly available yet)

(1) chromosome(7,036,071 bp)

a) List of BLAST results for probes for chromosome
b) BLAST search for a particular probe for chromsome

(2) pMLa(351,911 bp)

a) List of BLAST results for probes for pMLa
b) BLAST search for a particular probe for pMLa

(3) pMLb(208,315 bp)

a) List of BLAST results for probes for pMLb
b) BLAST search for a particular probe for pMLb


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